CV

Basics

Name Justin Jasper
Label Computational Biologist, AI Researcher
Email jtjasper@stanford.edu
Phone (770) 480-8093
Url https://justinjasper.github.io
Summary Deeply passionate about leveraging the intersection of computational biology and machine learning to tackle complex challenges in biomedical research and development.

Work

  • 06.2024 - Present
    Computational Biology Intern - MITRE Corporation
    Mclean, Virginia
    • Developed automation software to optimize high-throughput training and fine-tuning processes for open-source large language models (LLMs).
    • Developed an LLM-driven retrieval augmented generation system to extract and summarize key insights from complex scientific literature, streamlining knowledge access for synthetic biology workflows (Used scientific python, LangChain, LlamaIndex, Kubernetes).
    • Developed the BioNet Domain-Specific Language, an open-source programming language designed to enable extensive scaling of synthetic biology experiments and industrial workflows.
  • 12.2022 - 12.2023
    Co-Founder, CEO - Omniwear AI
    Palo Alto, California
    • Led the development of a cutting-edge B2B virtual try-on platform for e-commerce powered by computer vision and generative AI, catering specifically to the D2C retail clothing sector.
    • Spearheaded the B2B growth strategy, successfully acquiring early customer brands. Notably, secured partnerships with a retail giant valued at over $1 billion and a retailer valued at around $250 million
    • Established and maintained direct communication channels with corporate executives, ensuring seamless collaboration and addressing clients' unique needs and concerns.
    • Participated in Launchpad (Stanford’s premier graduate accelerator) Spring ‘23 and Entrepreneur First’s NYC unicorn training program.

Education

  • 01.2025 - 06.2026

    Palo Alto, CA

    M.S. Computer Science - Artificial Intelligence
    Stanford University
    • Artificial Intelligence: Principles and Techniques
    • Translational Bioinformatics
    • Computational Biology: Structure and Organization of Biomolecules and Cells
  • 09.2021 - 06.2025

    Palo Alto, CA

    B.S. Bioengineering
    Stanford University
    • Biochemistry & Molecular Biology
    • Physical Biology of Cells
    • Systems Physiology and Design
    • Fundamentals for Engineering Biology Lab
    • Biomedical System Prototyping Lab

Skills

Computational
Languages: Python, C++, C, MATLAB, UNIX
Frameworks: TensorFlow, LangChain, LlamaIndex, Scikit-learn
Libraries: Numpy, Pandas, OpenCV
AI/ML: Deep Learning, Bayesian Statistics, LLM Training & Deployment
Wet Lab
Cell Cultures: Mammalian Cell Cultures, Bacterial Cultures
Molecular Biology Techniques: PCR, Gel Electrophoresis, Transfections
Analytical Techniques: Chromatography, Cell Blotting, Flow Cytometry

Languages

English
Native speaker
Spanish
Proficient

Projects

  • 03.2024 - 03.2024
    CV Image Processing for CT and Ultrasound-based Tumor Detection
    • Developed a computer vision pipeline for lung CT scans using Python and OpenCV.
    • Achieved high accuracy in tumor segmentation using an Attention U-Net model.
    • Implemented K-means clustering for lung tissue classification.
  • 01.2025 - 01.2025
    CV Image Processing for Meal Nutritional Analysis
    • Developed a computer vision (CV)-based web application that detects and classifies food items from user-uploaded images.
    • Trained a ResNet18 convolutional neural network model on a Food image dataset from Kaggle (using Tensorflow).
    • Implemented an object detection pipeline to localize and identify food items before classification.
    • Built a full-stack web interface using HTML (frontend) and a Python Flask backend to allow users to upload images for real-time food classification.
  • 12.2024 - 12.2024
    Computational Analysis of NMDA Receptor Antagonist Binding for Chronic Pain Therapeutics
    • Investigated the molecular interactions between NMDA receptor antagonists and their binding sites using molecular docking simulations with SwissDock and AutoDock Vina.
    • Designed and optimized docking workflows, refining model parameters to maximize accuracy in predicting ligand-receptor interactions.
    • Quantified binding affinities to assess antagonist efficacy, providing computational insights for drug repurposing in chronic pain management.
  • 02.2024 - 02.2024
    Custom Heap Allocator (Memory Management & Systems Programming)
    • Designed and implemented a custom heap allocator in C, featuring both implicit and explicit free lists for dynamic memory allocation.
    • Optimized memory utilization and allocation efficiency by integrating block coalescing, splitting, and best-fit/free-list strategies.
    • Implemented a custom malloc, free, realloc, and calloc, improving memory allocation speed and fragmentation handling.
  • 05.2023 - 05.2023
    Synthetic Biosensor Development for Pathogen Detection
    • Engineered a novel biosensor using SynNotch receptors for Salmonella detection.
    • Optimized receptor expression using flow cytometry and Western blotting.
    • Utilized PCR, gel electrophoresis, and mammalian cell cultures.